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Problems in executing mpi with machinefile Ubuntu 18.04


What is the difference MPI vs OpenMP?Mpi file not recognized?How to check if the MPI already installed on my machineProblems with mpirun (openmpi)ubuntu 16.04 slurm srun failed with intel mpi?mpi exit code 65MPI: BLCR kernel module not presentUninstall and install MPIMPI cluster fails to connect to nodesRemove all previous version MPI and reinstall correctly it













0















following these guidelines MpichClusterUbuntu, I'm trying to execute my very first mpi program with a PC with Ubuntu 18.04.01 Server Edition and a laptop with Ubuntu 18.04.02 Desktop. Till step 11 of this guideline, everything went fine, with no problems at all.



I set up a machinefile called hosts
with these two lines:



192.168.1.7 # first 'master' node: the PC
192.168.1.5 # second node: the laptop


After compiling the very simple example file contained in the guidelines without:



#include <stdio.h>
#include <mpi.h>

int main(int argc, char** argv)
int myrank, nprocs;

MPI_Init(&argc, &argv);
MPI_Comm_size(MPI_COMM_WORLD, &nprocs);
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);

printf("Hello from processor %d of %dn", myrank, nprocs);
MPI_Finalize();
return 0;


mpiu@pc01:~$ mpicc mpi_hello.c -o mpi_hello


Executing without considering the machinefile 'hosts', this is the output:



mpiu@pc01:~$ mpiexec -n 8 ./mpi_hello
------------------------------------------------------------------
[[27419,1],0]: A high-performance Open MPI point-to-point messaging
module was unable to find any relevant network interfaces:

Module: OpenFabrics (openib)
Host: pc01

Another transport will be used instead, although this may result in
lower performance.

NOTE: You can disable this warning by setting the MCA parameter
btl_base_warn_component_unused to 0.
----------------------------------------------------------------
Hello from processor 1 of 8
Hello from processor 2 of 8
Hello from processor 5 of 8
Hello from processor 6 of 8
Hello from processor 0 of 8
Hello from processor 3 of 8
Hello from processor 7 of 8
Hello from processor 4 of 8
[pc01:25010] 7 more processes have sent help message help-mpi-btl-
base.txt / btl:no-nics
[pc01:25010] Set MCA parameter "orte_base_help_aggregate" to 0 to see all
help / error messages


And when executing calling the machinefile 'hosts', the execution remains idle without producing any output:



mpiu@pc01:~$ mpiexec -n 8 -machinefile hosts ./mpi_hello


What am I missing? What am I doing wrong?
Looking forward to your kind help.
Marco



PS:
this is the content of /etc/netplan/50-cloud-init.yaml in the "master" node (PC):



network:
ethernets:
enp3s0:
#addresses: []
#dhcp4: true
addresses: [192.168.1.7/24]
gateway4: 192.168.1.1
nameservers:
addresses: [8.8.8.8,8.8.4.4]
dhcp4: no
version: 2









share|improve this question




























    0















    following these guidelines MpichClusterUbuntu, I'm trying to execute my very first mpi program with a PC with Ubuntu 18.04.01 Server Edition and a laptop with Ubuntu 18.04.02 Desktop. Till step 11 of this guideline, everything went fine, with no problems at all.



    I set up a machinefile called hosts
    with these two lines:



    192.168.1.7 # first 'master' node: the PC
    192.168.1.5 # second node: the laptop


    After compiling the very simple example file contained in the guidelines without:



    #include <stdio.h>
    #include <mpi.h>

    int main(int argc, char** argv)
    int myrank, nprocs;

    MPI_Init(&argc, &argv);
    MPI_Comm_size(MPI_COMM_WORLD, &nprocs);
    MPI_Comm_rank(MPI_COMM_WORLD, &myrank);

    printf("Hello from processor %d of %dn", myrank, nprocs);
    MPI_Finalize();
    return 0;


    mpiu@pc01:~$ mpicc mpi_hello.c -o mpi_hello


    Executing without considering the machinefile 'hosts', this is the output:



    mpiu@pc01:~$ mpiexec -n 8 ./mpi_hello
    ------------------------------------------------------------------
    [[27419,1],0]: A high-performance Open MPI point-to-point messaging
    module was unable to find any relevant network interfaces:

    Module: OpenFabrics (openib)
    Host: pc01

    Another transport will be used instead, although this may result in
    lower performance.

    NOTE: You can disable this warning by setting the MCA parameter
    btl_base_warn_component_unused to 0.
    ----------------------------------------------------------------
    Hello from processor 1 of 8
    Hello from processor 2 of 8
    Hello from processor 5 of 8
    Hello from processor 6 of 8
    Hello from processor 0 of 8
    Hello from processor 3 of 8
    Hello from processor 7 of 8
    Hello from processor 4 of 8
    [pc01:25010] 7 more processes have sent help message help-mpi-btl-
    base.txt / btl:no-nics
    [pc01:25010] Set MCA parameter "orte_base_help_aggregate" to 0 to see all
    help / error messages


    And when executing calling the machinefile 'hosts', the execution remains idle without producing any output:



    mpiu@pc01:~$ mpiexec -n 8 -machinefile hosts ./mpi_hello


    What am I missing? What am I doing wrong?
    Looking forward to your kind help.
    Marco



    PS:
    this is the content of /etc/netplan/50-cloud-init.yaml in the "master" node (PC):



    network:
    ethernets:
    enp3s0:
    #addresses: []
    #dhcp4: true
    addresses: [192.168.1.7/24]
    gateway4: 192.168.1.1
    nameservers:
    addresses: [8.8.8.8,8.8.4.4]
    dhcp4: no
    version: 2









    share|improve this question


























      0












      0








      0








      following these guidelines MpichClusterUbuntu, I'm trying to execute my very first mpi program with a PC with Ubuntu 18.04.01 Server Edition and a laptop with Ubuntu 18.04.02 Desktop. Till step 11 of this guideline, everything went fine, with no problems at all.



      I set up a machinefile called hosts
      with these two lines:



      192.168.1.7 # first 'master' node: the PC
      192.168.1.5 # second node: the laptop


      After compiling the very simple example file contained in the guidelines without:



      #include <stdio.h>
      #include <mpi.h>

      int main(int argc, char** argv)
      int myrank, nprocs;

      MPI_Init(&argc, &argv);
      MPI_Comm_size(MPI_COMM_WORLD, &nprocs);
      MPI_Comm_rank(MPI_COMM_WORLD, &myrank);

      printf("Hello from processor %d of %dn", myrank, nprocs);
      MPI_Finalize();
      return 0;


      mpiu@pc01:~$ mpicc mpi_hello.c -o mpi_hello


      Executing without considering the machinefile 'hosts', this is the output:



      mpiu@pc01:~$ mpiexec -n 8 ./mpi_hello
      ------------------------------------------------------------------
      [[27419,1],0]: A high-performance Open MPI point-to-point messaging
      module was unable to find any relevant network interfaces:

      Module: OpenFabrics (openib)
      Host: pc01

      Another transport will be used instead, although this may result in
      lower performance.

      NOTE: You can disable this warning by setting the MCA parameter
      btl_base_warn_component_unused to 0.
      ----------------------------------------------------------------
      Hello from processor 1 of 8
      Hello from processor 2 of 8
      Hello from processor 5 of 8
      Hello from processor 6 of 8
      Hello from processor 0 of 8
      Hello from processor 3 of 8
      Hello from processor 7 of 8
      Hello from processor 4 of 8
      [pc01:25010] 7 more processes have sent help message help-mpi-btl-
      base.txt / btl:no-nics
      [pc01:25010] Set MCA parameter "orte_base_help_aggregate" to 0 to see all
      help / error messages


      And when executing calling the machinefile 'hosts', the execution remains idle without producing any output:



      mpiu@pc01:~$ mpiexec -n 8 -machinefile hosts ./mpi_hello


      What am I missing? What am I doing wrong?
      Looking forward to your kind help.
      Marco



      PS:
      this is the content of /etc/netplan/50-cloud-init.yaml in the "master" node (PC):



      network:
      ethernets:
      enp3s0:
      #addresses: []
      #dhcp4: true
      addresses: [192.168.1.7/24]
      gateway4: 192.168.1.1
      nameservers:
      addresses: [8.8.8.8,8.8.4.4]
      dhcp4: no
      version: 2









      share|improve this question
















      following these guidelines MpichClusterUbuntu, I'm trying to execute my very first mpi program with a PC with Ubuntu 18.04.01 Server Edition and a laptop with Ubuntu 18.04.02 Desktop. Till step 11 of this guideline, everything went fine, with no problems at all.



      I set up a machinefile called hosts
      with these two lines:



      192.168.1.7 # first 'master' node: the PC
      192.168.1.5 # second node: the laptop


      After compiling the very simple example file contained in the guidelines without:



      #include <stdio.h>
      #include <mpi.h>

      int main(int argc, char** argv)
      int myrank, nprocs;

      MPI_Init(&argc, &argv);
      MPI_Comm_size(MPI_COMM_WORLD, &nprocs);
      MPI_Comm_rank(MPI_COMM_WORLD, &myrank);

      printf("Hello from processor %d of %dn", myrank, nprocs);
      MPI_Finalize();
      return 0;


      mpiu@pc01:~$ mpicc mpi_hello.c -o mpi_hello


      Executing without considering the machinefile 'hosts', this is the output:



      mpiu@pc01:~$ mpiexec -n 8 ./mpi_hello
      ------------------------------------------------------------------
      [[27419,1],0]: A high-performance Open MPI point-to-point messaging
      module was unable to find any relevant network interfaces:

      Module: OpenFabrics (openib)
      Host: pc01

      Another transport will be used instead, although this may result in
      lower performance.

      NOTE: You can disable this warning by setting the MCA parameter
      btl_base_warn_component_unused to 0.
      ----------------------------------------------------------------
      Hello from processor 1 of 8
      Hello from processor 2 of 8
      Hello from processor 5 of 8
      Hello from processor 6 of 8
      Hello from processor 0 of 8
      Hello from processor 3 of 8
      Hello from processor 7 of 8
      Hello from processor 4 of 8
      [pc01:25010] 7 more processes have sent help message help-mpi-btl-
      base.txt / btl:no-nics
      [pc01:25010] Set MCA parameter "orte_base_help_aggregate" to 0 to see all
      help / error messages


      And when executing calling the machinefile 'hosts', the execution remains idle without producing any output:



      mpiu@pc01:~$ mpiexec -n 8 -machinefile hosts ./mpi_hello


      What am I missing? What am I doing wrong?
      Looking forward to your kind help.
      Marco



      PS:
      this is the content of /etc/netplan/50-cloud-init.yaml in the "master" node (PC):



      network:
      ethernets:
      enp3s0:
      #addresses: []
      #dhcp4: true
      addresses: [192.168.1.7/24]
      gateway4: 192.168.1.1
      nameservers:
      addresses: [8.8.8.8,8.8.4.4]
      dhcp4: no
      version: 2






      18.04 cluster mpi






      share|improve this question















      share|improve this question













      share|improve this question




      share|improve this question








      edited 7 hours ago







      user2315094

















      asked 9 hours ago









      user2315094user2315094

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